- Ybe, J.A., Mishra, S., Helms, S., and Nix, J. 2006. Crystal structure at 2.8 Å of the DLLRKN-containing coiled-coil domain of Huntingtin-interacting protein 1 (HIP1) reveals a surface suitable for clathrin light chain binding. Journal of Molecular Biology (in press) .
- Perez-Miller, S., Niu, Q., Coates, D.A., Drazer, M., Clegg, M.E., and Ybe, J.A. Light chain subunits contribute to the stability of clathrin heavy chain trimers (to be submitted) .
- Anderson, S., Dragnea, V., Masuda, S., Ybe, J.A., Moffat, K., and Bauer, C. 2005. Structure of a Novel Photoreceptor, the BLUF Domain of AppA from Rhodobacter sphaeroides. Biochemistry 44, 7998-8005.
- Ybe, J.A., Ruppel, N., Mishra, S., and VanHaaften, E. 2003. Contribution of Cysteines to Clathrin Trimerization Domain Stability and Mapping of Light Chain Binding. Traffic 4, 850-856.
- Ybe, J.A., Wakeham, D.E., Brodsky, F.M., and Hwang, P.K. 2000. Molecular structures of proteins involved in vesicle fusion. Traffic 1, 474.
- Wakeham, D.E., Ybe, J.A., Brodsky, F.M., and Hwang, P.K. 2000. Molecular structures of proteins involved in vesicle coat formation. Traffic 1, 393-398.
- Ybe, J.A., Brodsky, F.M., Hofmann, K., Lin, K., Liu, S.H., Chen, L., Earnest, T.N., Fletterick, R.J., and Hwang, P.K. 1999. Clathrin self-assembly is mediated by a tandemly repeated superhelix. Nature 399, 371-375.
- Dong, S., Ybe, J.A., Hecht M.H., and Spiro, T.G. 1999. H-Bonding Maintains the Active Site of Type 1 Copper Proteins: Site-Directed Mutagenesis of Asn38 in Poplar Plastocyanin. Biochemistry 38, 11:3379-3385.
- Ybe, J.A., Greene, B., Liu, S.H., Pley, U., Parham, P., and Brodsky, F.M. 1998. Clathrin self assembly is regulated by three light-chain residues controlling the formation of critical salt bridges. EMBO J. 17, 1297-1303.
- Ybe, J.A. and Hecht, M.H. 1996. Sequence replacements in the central b-turn of plastocyanin. Protein Science 5, 814-824.
- Qiu, D., Dong, S., Ybe, J.A., Hecht, M.H., and Spiro, T.G. 1995. Variations in the Type I Copper Protein Coordination Group: Resonance Raman Spectrum of 34S-, 65Cu-, and 15N-Labeled Plastocyanin. J. Amer. Chem. Soc. 117, 24:6443-6446.
- Ybe, J.A. and Hecht, M.H. 1994. Periplasmic Fractionation of Escherichia coli Yields Recombinant Plastocyanin Despite the Absence of a Signal Sequence. Protein Expression and Purification 5, 317-323.
- Ybe, J.A. and Kahn, P.C. 1994. Slow-folding kinetics of ribonuclease-A by volume change and circular dichroism: Evidence for two independent reactions. Protein Science 3: 638-649.
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